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quinta-feira, 17 de fevereiro de 2011

FAO - repositorios digitales abiertos sobre la agricultura

Para contribuir a la investigación y la innovación en la agricultura es fundamental facilitar el acceso abierto a la información técnica y científica de dominio público. La creación de repositorios digitales con documentos a texto completo, ofrece posibilidades sin precedentes para que las organizaciones y los individuos puedan capturar y compartir de manera estructurada los resultados de sus investigaciones en la agricultura. Lo anterior aumenta la transparencia y propicia la comunicación entre los investigadores y demás grupos interesados.

El nuevo módulo de e-learning (aprendizaje electrónico) denominado Bibliotecas, repositorios y documentos digitales, brinda los elementos esenciales para aprender a crear repositorios y bibliotecas digitales. Dicho módulo forma parte del Repertorio de Recursos para la Gestión de la Información (IMARK, por sus siglas en inglés), el cual abarca todos los procesos relevantes para la planificación y asignación de recursos, considerando a la vez lo más reciente en tecnologías y tendencias para la gestión de los datos digitales y su conservación. Cubre además los aspectos más relevantes relacionados con el marco jurídico del derecho de autor y sobre la propiedad intelectual.

El módulo se ofrece en línea y en CD-ROM de forma gratuita y actualmente está disponible en idioma inglés. A partir de junio 2011, también se ofrecerá en español. Para obtener más información, visite el sitio web del IMARK.

Este módulo fue desarrollado por la Organización de las Naciones Unidas para la Agricultura y la Alimentación (FAO), con el apoyo del Departamento Británico para el Desarrollo Internacional (DFID), la Red Internacional para la Disponibilidad de Publicaciones Científicas (INASP), en el contexto de mejorar "la coherencia en la información para la investigación agraria para el desarrollo" (CIARD), una asociación mundial única que apoya la comunicación de la ciencia y la investigación en la agricultura.
 

Edição de fevereiro da revista 'Memórias do Instituto Oswaldo Cruz' pode ser acessada online

         
       Após comemorar o início de 2011 com a marca de revista científica brasileira com maior fator de impacto no Scimago Journal Ranking (SJR), com 0,142 pontos, a primeira edição do ano da revista Memórias do Instituto Oswaldo Cruz traz 18 artigos de instituições nacionais e internacionais e conta com pesquisas inéditas sobre malária, doença de Chagas e  leishmaniose. Um estudo realizado na área metropolitana de Porto Alegre trouxe a primeira confirmação da circulação de metapneumovírus humano (hMPV) e do bocavírus humano (hBoV) na região. Os agentes estão associados a infecções do trato respiratório inferior entre crianças. Foram analisadas 455 amostras de pacientes coletadas entre maio de 2007 e junho de 2008. O hMPV foi detectado em 14,5% e o hBoV em 13,2% do total. A taxa de co-infecção foi de 43,7%, o que fornece evidências de envolvimento frequente de ambos os vírus em crianças com infecção aguda do trato respiratório viral. O artigo é assinado por pesquisadores do Hospital de Clínicas de Porto Alegre da Universidade Federal do Rio Grande do Sul (UFRGS), Universidade Feevale e Santa Casa de Misericórdia de Porto Alegre.
 Imagem na capa da nova edição da revista mostra oocistos de <EM>Plasmodium vivax</EM> no intestino médio de um <EM>Anopheles cracens</EM>
Imagem na capa da nova edição da revista mostra oocistos de Plasmodium vivax no intestino médio de um Anopheles cracens  

             Uma pesquisa reunindo cientistas da Tailândia e Coreia do Sul testou o potencial de transmissão da malária de cinco espécies de mosquitos anofelinos encontradas em diferentes regiões tailandesas. Em laboratório, nove colônias de cinco espécies de complexos Anopheles barbirostris foram infectadas experimentalmente com Plasmodium falciparum e P. vivax, os principais parasitos causadores da malária. As amostras de A. campestris obtidas nas localidades tailandesas de Chiang Mai e Udon Thani, bem como as espécies A. barbirostris A3 e A. barbirostris A4 não foram consideradas vetoras potenciais de P. falciparum. Amostras de A. campestris das localidades de Sa Kaeo e Ayuttaya e as espécies de A. barbirostris A4 mostraram-se vetores não-potenciais para P. vivax. A pesquisa revelou também que as espécies de A. barbirostris A1, A2 e A3 foram vetores de baixo potencial para P. vivax. Já as amostras de A. cracens e A. campestris da localidade de Chiang Mai foram vetores de alto potencial para P. vivax.
Ainda na edição de fevereiro das Memórias, um artigo desenvolvido por pesquisadores da Fiocruz Bahia, Universidade Federal da Bahia (UFBA) e Universidade Federal do Rio de Janeiro (UFRJ) investigou a associação dos níveis de diferentes citocinas (moléculas envolvidas nas reações imunes do organismo) com a resposta inflamatória e a progressão da leishmaniose. No experimento, camundongos foram infectados com L. amazonensisisoladas de pacientes com diferentes graus de manifestação da doença (leishmaniose localizada, cutâneo-difusa e leishmaniose visceral). Os resultados apontam que os níveis das citocinas IFN-γ, IL-4 e IL-10 não diferiu entre os grupos. O estudo constatou ainda que todos os grupos foram incapazes de controlar a infecção. Os pesquisadores sugerem que a expressão de IL-4 associada à baixa produção de IFN-γ na fase inicial da infecção pode contribuir para a susceptibilidade, mas ponderam que outros fatores podem contribuir para as diferenças observadas na resposta inflamatória e progressão da infecção.
           O comportamento alimentar do Triatoma vitticeps – uma espécie de barbeiro encontrada no Espírito Santo, Minas Gerais, Rio de Janeiro e sul da Bahia, considerado vetor potencial para a doença de Chagas – foi investigado com o objetivo de identificar suas fontes de alimento e caracterizar seu processo de ingestão de sangue. O estudo testou se a saliva do vetor interfere na percepção do hospedeiro durante a picada: foi demonstrado que a saliva do T. vitticeps diminui, gradualmente e de forma irreversível, a amplitude do potencial de ação da fibra nervosa do hospedeiro, o que ajuda a diminuir a percepção da picada do inseto pelo hospedeiro. O estudo foi desenvolvido por pesquisadores da Fiocruz Minas, Laboratório Nacional e Internacional de Referência em Taxonomia de Triatomíneos do Instituto Oswaldo Cruz (IOC/ Fiocruz) e Universidade Federal de Minas Gerais.
          Acesse gratuitamente a edição das Memórias aqui.

Biblioteca apresenta bases de dados SciVerse Scopus e SciVerse ScienceDirect no dia 18/2

A Biblioteca da Saúde da Mulher e da Criança apresenta, no dia 18/2, no Anfiteatro B do Instituto Fernandes Figueira, as bases de dados SciVerse Scopus e SciVerse ScienceDirect. A apresentação faz parte do processo de educação continuada e tem como objetivo fornecer uma visão sistemática das bases de dados bibliográficas e respectivos mecanismos de busca, com vistas à melhoria do trabalho de referência virtual do Serviço. O treinamento será ministrado pelos representantes da Elsevier.

A base SciVerse ScienceDirect é uma coleção eletrônica de textos completos provenientes de mais de 2.500 revistas científicas Elsevier, com mais de 10 milhões de artigos nas áreas científica, tecnológica e médica, representando aproximadamente 25% da produção científica mundial. O Science Direct ainda oferece aos seus usuários livros eletrônicos, séries de livros, manuais e enciclopédias em diversas áreas do conhecimento, com acesso rápido e confiável a descobertas relevantes e análises. Em constante expansão, a coleção de livros no
Science Direct vem facilitar o acesso mais abrangente a informações técnicas e científicas.

A SciVerse Scopus é a maior base de resumos e referências bibliográficas de literatura científica revisada por pares, com mais de 18.000 títulos de 5.000 editoras internacionais. Scopus permite uma visão multidisciplinar da ciência e integra todas as fontes relevantes para a pesquisa básica, aplicada e inovação tecnológica, através de patentes, fontes da web de conteúdo científico, periódicos de acesso aberto, memórias de congressos e conferências. É atualizado diariamente e contém os Articles in Press de mais de 3.000 revistas.

As duas Bases podem ser acessadas através do Portal de Periódicos da CAPES.

Data: 18/2, das 9h às 12h
Local: Anfiteatro B do IFF
Av. Rui Barbosa 716 – Flamengo
Rio de Janeiro – RJ

Novo tratamento para calvície pode ter sido descoberto por acaso

Composto químico fez cabelo crescer de novo em camundongos. Cientistas estavam estudando funções gastrointestinais.
Evolução da calvície nos camundongos submetidos ao tratamento (Foto: UCLA/VA)
Evolução da calvície nos camundongos submetidos ao tratamento
Pesquisadores norte-americanos podem ter descoberto – completamente por acaso – um composto químico que provoca o crescimento de cabelo. Eles estavam pesquisando a influência do estresse sobre as funções gastrointestinais. A descoberta foi publicada pelo jornal científico “PLoS One”.

Os cientistas da UCLA (Universidade da Califórnia, em Los Angeles) fizeram alterações genéticas em camundongos para que eles produzissem em maior quantidade um hormônio ligado ao estresse chamado fator liberador de corticotrofina (CRF, na sigla em inglêS). Uma das conseqüências foi a perda de pelos nas costas.

Em seguida, injetaram nos camundongos um composto chamado astressina-B, um peptídeo capaz de bloquear o efeito do CRF, durante cinco dias seguidos. Mediram os efeitos do composto sobre o sistema digestivo dos animais e colocaram-nos de volta às gaiolas, junto aos demais camundongos. Três meses depois, quando deveriam repetir as medições, perceberam que os pelos nas costas tinham crescido novamente.

“Quando analisamos o número de identificação dos camundongos em cujas costas cresceram pelos descobrimos que, de fato, o peptídio astressina-B foi responsável pelo notável crescimento de pelos nos camundongos calvos”, disse Million Mulugeta, um dos autores da pesquisa. “Estudos subsequentes confirmaram isso sem dúvidas”.

Por enquanto, os testes foram realizados apenas com camundongos, mas os pesquisadores têm esperanças de que este possa se tornar um tratamento eficiente contra a calvície. “Poderia abrir novos campos para tratar a perda de cabelo em humanos por meio da modulação de receptores de hormônios de estresse, particularmente a perda de cabelo ligada ao estresse crônico e ao envelhecimento”, argumentou Mulugeta.

Nanopartículas podem ser tão perigosas quanto amianto?

Nanopartículas podem ser tão perigosas quanto amianto
O dióxido de titânio, para ser incluído nos produtos, tem suas partículas reduzidas até dimensões de nanômetros - 1 nanômetro é igual a 1 bilionésimo de metro.

Nanopartículas de titânio
Frequentes nos protetores solares e nos cosméticos, as nanopartículas de dióxido de titânio provocariam nos pulmões efeitos similares aos do amianto.
Os cientistas suíços se alarmaram com suas conclusões, mas seus resultados são colocados em dúvida por outros estudos. As autoridades do país adiaram a publicação de uma estratégia para a área.
Mais de dois milhões de toneladas de dióxido de titânio nanométrico (nano-TiO2) são produzidos no mundo, todo ano.
Utilizado como pigmento e para opacificar, esse nanomaterial entra na composição de tintas, cosméticos, protetores solares, remédios, pasta dental, colorantes alimentares e numerosos outros produtos de uso corrente, segundo artigo da agência suíça ATS.
Amianto e silício
Pesquisadores do Departamento de Bioquímica da Universidade de Lausanne, da Universidade de Orléans (França) e do Centro Nacional Francês de Pesquisa Científica (CNRS), estudaram as inflamações causadas pelo nano-TIO2.
Eles testaram o material em células humanas e em ratos de laboratório.
Segundo os resultados, as nanopartículas de TiO2 produzem efeitos similares aos de outros dois irritantes ambientais bem conhecidos, o amianto e o silício.
Como aqueles materiais, as nanopartículas ativam o inflamasoma NLRP3 - um complexo multiproteico -, provocando uma reação inflamatória e a produção de derivados reativos de oxigênio, moléculas tóxicas capazes de atacar o DNA, as proteínas e as membranas celulares.
"Da mesma maneira que o amianto, você acumula partículas de titânio nanométrico nos pulmões", explica Jürg Tschopp, responsável pela pesquisa e professor de química biológica na Universidade de Lausanne.
Amianto do futuro
"Meu receio é que essas partículas se tornem o amianto do futuro," acrescenta Tschopp, vencedor do Prêmio Louis-Jeantet 2008 de medicina. "Há 40 anos, estávamos no mesmo ponto com o amianto. Havia indícios do perigo de provocar câncer, mas os dados não eram significativos", lembra o pesquisador.
"Atualmente, não podemos excluir que as nanopartículas também sejam perigosas como o amianto".
Mas Jürg Tschopp admite que ele mesmo não deixará de usar creme solar nem de escovar os dentes com um dentifrício contendo as nanopartículas.
Mas será preciso, de acordo come ele, que esse tema entre na agenda política, que seja elaborado um regulamento e que sejam reforçadas as precauções.
"Para evitar a mesma catástrofe que a do amianto, será necessário questionar até onde podemos renunciar às nanopartículas.
A seguradora de acidentes Suva acompanha a questão de perto. "As nanopartículas não devem se tornar o amianto de amanhã," indica a seguradora.
Toxicidade
Quanto aos consumidores, o novo estudo é visto com bons olhos. "É importante ressaltar que o estudo aborda a toxicidade das nanopartículas de dióxido de titânio", explica Huma Khamis, da Federação de Consumidores da Suíça francesa (FRC). Ora, estas não são sempre utilizadas na forma nanométrica nos produtos de grande consumo."
A FRC pondera que "os cremes solares constituem uma exceção, embora os perigos potenciais de uma exposição ao sol sem protetor são maiores. É um grande dilema," opina Huma Khamis.
Segundo o relatório 2010 sobre as nanotecnologias na Suíça, o governo federal teve um papel pioneiro na Suíça na ciência do infinitamente pequeno, descobrindo seu potencial muito cedo.
Um relatório federal estratégico foi publicado em 2008. Um segundo relatório é aguardado desde novembro. Em dezembro passado, o Programa Nacional de Pesquisa "oportunidades e riscos dos nanomateriais" foi lançado, com 18 pesquisas separadas.
Controvérsia
Peter Gehr, presidente do comitê de direção do PNR é muito crítico do estudo, que foi publicado na revista científica PNAS.
"É simplesmente impossível comparar a nanotecnologia com o amianto. É uma aberração", denuncia.
"Partir de uma reação celular aguda e deduzir que isso pode provocar câncer é simplesmente uma loucura", diz esse especialista em pulmões e professor de anatomia.
Peter Gehr admite, no entanto, uma grande "distância" entre nossos conhecimentos acerca de uma exposição crônica às nanopartículas e os efeitos a longo prazo sobre os humanos e o meio ambiente.
"É verdade, muitas questões ainda não têm resposta," diz Huma Khamis. "Por exemplo, como evoluem as nanopartículas nos produtos, será que elas formam moléculas maiores?"
Outro problema para os consumidores: hoje é impossível saber se um produto contém nanopartículas ou não.
O relatório anunciado para novembro deveria esclarecer certos produtos e poderia exigir que alguns sejam retirados do mercado, estima Huma Khamis.

Queda de cabelo precoce é associada ao câncer de próstata

Calvície precoce
Homens que começam a perder cabelo na faixa dos 20 anos podem ter maior risco de desenvolver câncer de próstata no futuro.
Esta é a conclusão de um estudo realizado na França, publicado nesta terça-feira na revista Annals of Oncology.
A pesquisa comparou 388 portadores de tumores na próstata com um grupo controle de 281 homens saudáveis e verificou que, entre aqueles com a doença, a porcentagem dos que começaram a ficar calvos aos 20 e poucos anos era duas vezes maior do que nos demais.
Para aqueles cuja calvície começou depois dos 30 ou depois dos 40, não houve diferença no risco de desenvolver câncer de próstata em comparação com o grupo controle.
Queda de cabelo e hormônios
A alopécia androgênica é a queda de cabelos que afeta principalmente os homens.
Cerca de 50% do público masculino será afetado em algum momento da vida.
Relações entre calvície e hormônios androgênicos (como a testosterona) são conhecidas, da mesma forma que a relação entre esses hormônios e o câncer de próstata.
A finasterida - medicamento usado no tratamento da calvície - bloqueia a conversão de testosterona em um androgênio chamado dihidrotestosterona, que se estima estar envolvida na queda de cabelos.
O medicamento, que também é usado para tratar câncer de próstata, tem como efeitos colaterais mais citados na literatura médica a diminuição da libido e a disfunção erétil.
Queda de cabelos e câncer de próstata
Os autores do estudo apontam a relação observada entre a queda de cabelo precoce o risco de desenvolvimento da doença mas ressaltam que os mecanismos por trás dessa associação são ainda desconhecidos.
"Mais estudos são necessários, tanto com maiores grupos como no nível molecular, de modo a encontrarmos as ligações desconhecidas entre hormônios androgênicos, calvície precoce e câncer de próstata", disse Michael Yassa, que na época do estudo estava no Hospital Europeu Georges Pompidou, em Paris, e atualmente é professor na Universidade de Montreal, no Canadá.
"Precisamos também encontrar formas de identificar aqueles que têm mais risco de desenvolver a doença e que poderiam se beneficiar dos exames de diagnóstico. Com isso, poderíamos começar a considerar a prevenção por meio de drogas antiandrogênicas. A calvície precoce pode ser um desses fatores de risco", destacou Philippe Giraud, professor da Universidade de Paris Descartes, que coordenou a pesquisa.

Dwarfism Gene Linked to Protection from Cancer and Diabetes

ScienceDaily (Feb. 16, 2011) — A 22-year study of abnormally short individuals suggests that growth-stunting mutations also may stunt two of humanity's worst diseases.
 long-term study finds extremely low incidence of cancer and diabetes among individuals with a growth-stunting genetic defect. The authors ask whether controlling growth hormone in healthy adults might provide similar protection.
Published in Science Translational Medicine, the study raises the prospect of achieving similar protection in full-grown adults by other means, such as pharmaceuticals or controlled diets.
The international study team, led by cell biologist Valter Longo of the University of Southern California and Ecuadorian endocrinologist Jaime Guevara-Aguirre, followed a remote community on the slopes of the Andes mountains.

The community includes many members with Laron syndrome, a deficiency in a gene that prevents the body from using growth hormone. The study team followed about 100 such individuals and 1,600 relatives of normal stature.

Over 22 years, the team documented no cases of diabetes and one non-lethal case of cancer in Laron's subjects.

Among relatives living in the same towns during the same time period, 5 percent were diagnosed with diabetes and 17 percent with cancer.

Because other environmental and genetic risk factors are assumed to be the same for both groups, Longo and his team concluded that -- at least for adults past their growing years -- growth hormone activity has many downsides.

"The growth hormone receptor-deficient people don't get two of the major diseases of aging. They also have a very low incidence of stroke, but the number of deaths from stroke is too small to determine whether it's significant," Longo said.

Overall lifespan for both groups was about the same, with the abnormally short subjects dying more often from substance abuse and accidents. The study did not include psychological assessments that could have helped explain the difference.

"Although all the growth hormone deficient subjects we met appear to be relatively happy and normal and are known to have normal cognitive function, there are a lot of strange causes of death, including many that are alcohol-related," Longo said.

Longo noted that any treatment for preventive reduction of growth hormone would have to show fewer and milder side effects than drugs used against a confirmed disease.

But he added that any preventive treatment would target adults with high growth hormone activity in order to bring it down to average, and not to the extremely low and potentially riskier state observed in Laron's subjects.

If high growth factor levels "become a risk factor for cancer as cholesterol is a risk factor for cardiovascular diseases," drugs that reduce the growth factor could become the new statins, Longo said.

Such drugs would be used at first only for families with a very high incidence of cancer or diabetes.

And because growth hormone activity decreases naturally with age, any preventive treatment would be appropriate only until the effects of advanced age took over, Longo explained.

Animal studies provide evidence for the health benefits of blocking growth hormone. Groups led by John Kopchick of Ohio University and Andrzej Bartke of Southern Illinois University achieved a record 40 percent lifespan extension with growth factor deficient mice in studies published in 2000 and 1996, respectively.

Later, the researchers linked growth factor deficiency to reduced tumor risk.

The Food and Drug Administration has already approved drugs that block growth hormone activity in humans. These are used to treat acromegaly, a condition related to gigantism.

Because studies have shown that growth hormone deficiency protects mouse and human cells against some chemical damage, Longo said his team would initially seek approval for a clinical trial to test such drugs for the protection of patients undergoing chemotherapy.

Growth hormone-blocking drugs such as pegvisomant appear to be well tolerated, Longo said. But even if chronic growth hormone blocking should come with a minor side effect, Longo predicted that societies and governments would make the trade in exchange for less chronic disease.

He called it the "square survival curve," where most of one's life is lived without major illness.

"It's the dream of every administration, anywhere in the world. You live a long healthy life, and then you drop dead," Longo said.

Exactly how growth hormone deficiency might protect a person is not fully understood.

In test tube studies, Longo's team found that serum from Laron's subjects had a double protective effect: it protected DNA against oxidative damage and mutations but it promoted the suicide of cells that became highly damaged.

Laron's subjects tend to have very low insulin levels and low insulin resistance, which may explain the absence of diabetes.

In joint experiments with a group led by Rafael de Cabo at the National Institute on Aging, human cells exposed to the Laron's serum also showed surprising changes in the activity of genes linked to life extension in yeast and other model organisms. Although Longo and colleagues had identified such genes 15 years ago, they had not been shown to be important for disease prevention in humans.

Artificial hormone blocking is not the only way to reduce these hormones in humans.

A natural method appears to achieve the same effect: restriction of calories or of specific components of the diet such as proteins.

Several studies are underway to assess the effect of dietary restriction in humans and other primates. The results are not yet known, but a recent study by Longo's group showed that fasting induces rapid changes in growth factors similar to those caused by the Laron mutation.

However, because fasting or restriction in particular nutrients for long periods can lead to dangerous conditions including anorexia, reduced blood pressure and immunosuppression -- and because individuals with rare genetic mutations can suffer life-threatening effects from even short periods of fasting -- Longo emphasized that additional studies are needed and that any changes in diet must be approved and monitored by a physician.

The study in Science Translational Medicine began as an attempt by Longo to test evidence from animal studies that longevity mutations prevent progressive DNA damage and/or cancer.

Co-author Guevara-Aguirre wanted to understand the reasons for the stunted growth of children in the remote community, centered in the Loja province of southern Ecuador.

Initially, Longo said, the children "were more looked at in search of problems than solutions."

But as the study wore on, Guevara-Aguirre began to notice that the adults in the community were not dying of the usual chronic diseases.

That was the clue Longo had been seeking. After hearing of the Ecuador study, he invited Guevara-Aguirre to present at a symposium on aging and cancer in 2006 at USC's Leonard Davis School of Gerontology, where Longo is associate professor.

Together, they obtained funding from the Center of Excellence in Genomic Science in the USC College of Letters, Arts and Sciences, which sponsored part of the initial field research in Ecuador, and from the National Institute on Aging, which sponsored the cellular studies.

Longo and Guevara-Aguirre's collaborators were co-lead author Priya Balasubramaniam, postdoctoral researcher in Longo's laboratory in the USC Leonard Davis School of Gerontology; Sue Ingles, associate professor in the Keck School of Medicine of USC; Min Wei, research assistant professor, Federica Madia, research associate, and Chia-Wei Cheng, graduate student, all in Longo's lab; Marco Guevara-Aguirre and Jannette Saavedra of the Institute of Endocrinology, Metabolism and Reproduction, in Quito, Ecuador; David Hwang and Pinchas Cohen of the David Geffen School of Medicine at UCLA; Rafael de Cabo of the National Institute on Aging; and Alejandro Martin-Montalvo of the National Institute on Aging and the Centre for Biomedical Research on Rare Diseases in Sevilla, Spain.

Balasubramaniam and Marco Guevara-Aguirre were responsible for major parts of the study in the laboratory and in the field, respectively.

New Pneumococcal Vaccine Approach Successful in Early Tests; Vaccine Inhibits Bacteria by Mimicking Naturally-Acquired Immunity

ScienceDaily (Feb. 16, 2011) — Pneumococcus (Streptococcus pneumoniae) accounts for as much as 11 percent of mortality in young children worldwide. While successful vaccines like Prevnar® exist, they are expensive and only work against specific pneumococcal strains, with the risk of becoming less effective as new strains emerge. Through a novel discovery approach, researchers at Children's Hospital Boston and Genocea Biosciences, Inc., in collaboration with the international nonprofit organization PATH, developed a new vaccine candidate that is potentially cheaper and able to protect against any pneumococcal strain.

Tested in mice, the protein-based vaccine successfully inhibited S. pneumoniae from establishing a foothold in the body, the researchers report in the February 17 issue ofCell Host & Microbe.

The current multivalent conjugate pneumococcal vaccines work by inducing people to make antibodies against the sugars on the bacterium's outer capsule. The antibodies then help fight off development of disease after the bacteria have colonized the body. But these vaccines are complex to manufacture, requiring separate individual components for sugars produced by multiple pneumococcal strains. Since pneumococci can make more than 90 different types of sugars, the vaccines may become less effective over time.

The new protein-based vaccine takes a different approach. Based on close to a decade of research at Children's Hospital Boston and utilizing Genocea's novel vaccine discovery technology developed at Harvard Medical School, it stimulates a group of cells in the body known as TH17 cells. These cells provide natural immunity to pneumococcal infection by clearing the bacteria from the surfaces of the upper respiratory tract where infection starts.

Six years ago, Children's Richard Malley, MD, and colleagues showed in mice that while antibodies against surface proteins can protect against pneumococcal disease, there is another mechanism of protection that doesn't require antibodies: the body has natural defenses that act as security guards, preventing the bacteria from becoming squatters in the upper respiratory tract. More recently, they showed that this protection is centered in TH17 cells and production of the chemical messenger IL-17A.

The current study, led by Malley and Kristin Moffit, MD of Children's and Todd Gierahn, PhD, and Jessica Flechtner, PhD, of Genocea Biosciences, began by evaluating a comprehensive library of S. pneumoniae proteins, seeking those that stimulated TH17 cells in mice. They identified specific pneumococcal proteins that activated TH17 cells and used them to make a new vaccine formulation.

When live mice were immunized with these antigens, they showed near-complete protection from S. pneumoniae upper respiratory tract colonization. These same antigenic proteins also potently stimulated human TH17 cells from healthy adult volunteers, causing them to secrete IL-17A.

"The next steps, already in motion, are to optimize the formulation of this vaccine, confirm its efficacy and safety in animals, and then proceed to human trials," says Malley.

In further collaboration with PATH, the researchers will refine and test the most promising formulation in preclinical studies. If the vaccine proves to be effective and safe, the group will prepare an Investigational New Drug (IND) application to the FDA to begin clinical trials.

Unlike existing conjugate vaccine components, the new pneumococcal protein-based vaccine antigens are common to all strains of S. pneumoniae. The researchers hope that a combination of 3 to 5 antigens will protect against pneumococcal colonization and disease from all strains, thereby providing comprehensive immunity with a universal vaccine that would be significantly less complex and expensive to manufacture.

Malley believes that an approach focusing on stimulating TH17 cells or IL-17A secretion may also be effective in providing protection against other pathogens such as Staphylococcus aureus, Mycobacterium tuberculosis, or Listeria monocytogenes.

"By combining advances in molecular biology, immunology and bioinformatics, the strategy we use at Genocea allows comprehensive, rapid, and unbiased screens of every protein produced by an infectious agent to identify the most effective T cell- stimulating antigens," says Flechtner. "We look forward to our continued collaboration and the development of an improved pneumococcal vaccine."

Overabundance of Protein Expands Breast Cancer Stem Cells; Two Drugs Block Cancer-Promoting Chain of Events

ScienceDaily (Feb. 16, 2011) — An essential protein for normal stem cell renewal also promotes the growth of breast cancer stem cells when it's overproduced in those cells, researchers at The University of Texas MD Anderson Cancer Center report in the February edition of Cancer Cell.

In mouse and lab experiments, the team also discovered that two drugs block the cascade of molecular events that they describe in the paper, thwarting formation of breast tumor-initiating cells.

"Overexpression of the EZH2 protein has been linked to breast cancer progression, but the molecular details of that connection were unknown," said senior author Mien-Chie Hung, Ph.D., professor and chair of MD Anderson's Department of Molecular and Cellular Oncology.

"Tumor-initiating cancer cells that arise from the primary cancer stem cells also are thought to drive cancer progression," Hung said. "This research connects EZH2 to the growth of breast tumor-initiating cells."

EZH2 blocks DNA damage repair

The molecular chain of events that improves self-renewal, survival and growth of these breast cancer stem cells can be initiated by oxygen-starved portions of a tumor, Hung said. This hypoxia stimulates a protein that in turn causes overexpression of EZH2.

Abundant EZH2, the team showed, dampens production of an important protein involved in DNA damage repair. Unrepaired chromosomal damage then amplifies production of RAF1, which unleashes a molecular cascade that promotes expansion of breast tumor-initiating cells and cancer progression.

Two drugs slash breast cancer stem cell population

The team tested five anti-cancer drugs against a culture of breast cancer cells and in tumor samples of human breast cancer in a mouse model. Sorafenib, a RAF inhibitor also known as Nexavar, eliminated more cancer stem cells and blocked tumor formation better than the other four.

Sorafenib inhibits multiple targets, so the researchers also tested an experimental drug called AZD6244, which specifically inhibits the MEK-ERK kinase cascade launched by RAF1. They found the drug eliminates EZH2-promoted breast cancer stem cells and blocks the formation of precancerous mammospheres.

"The drugs' inhibition of the breast tumor-initiating cells reveals a previously unidentified therapeutic effect for RAF1-ERK inhibitors to prevent breast cancer progression," Hung said. AZD6244 is being tested in multiple clinical trials, he noted, and it will be interesting to see whether the cancer-stem-cell-killing ability will be induced in those trials.

Hunting down a dangerous pathway

Breast cancer stem cells can be sorted from other primary cancer cells by the presence of the surface protein CD44 and low or absent CD24 in tumor cells.

The researchers found that high expression of EZH2 in breast cancer stem cells reduced the levels of the tumor suppressor RAD1 and correlated with high-grade tumors in a sample of 168 human breast cancer tumors. It also increased the number of tumor-initiating cells in culture.

EZH2 also is heavily expressed, and RAD1 diminished, by lack of oxygen in the tumor's environment, which causes activation of the HIF1a(alpha) protein. HIF1a(alpha), the researchers found, activates the EZH2 gene by binding to the gene's promoter region.

With RAD1 unable to repair damage, amplified RAF1 triggers the MEK-ERK-ß-Catenin pathway, a well-known cancer promoting molecular pathway. The team showed EZH1 enhances this signaling pathway, which they found correlates with breast cancer progression.

In December, Hung and colleagues published a paper in Nature Cell Biology showing that the enzyme CDK1 shuts down EZH2.

Research was funded by grants from the National Cancer Institute, including those for MD Anderson's Specialized Program in Research Excellence (SPORE) for breast cancer and MD Anderson's cancer center support grant; the U.S. Department of Defense, the National Science Council of Taiwan, the Cancer Center of Excellence in Taiwan, National Breast Cancer Foundation, Inc., Kadoorie Charitable Foundation, Beast Cancer Research Foundation and the MD Anderson-China Medical University and Hospital Sister Institution Fund.

Co-authors with Hun, who also is MD Anderson vice president of basic research, are lead author Chun-Ju Chang, Ph.D., Jer-Yen Yang, Ph.D., Weiya Xia, M.D., Chun-Te Chen, Xiaoming Xie, Ph.D., Chi-Hong Chao, Ph.D., and Jung-Mao Hsu, all of MD Anderson's Department of Molecular and Cellular Oncology; Wendy Woodward, M.D., Ph.D., MD Anderson's Department of Radiation Oncology; and Gabriel Hortobagyi, M.D., of MD Anderson's Department of Breast Medical Oncology. Hsu is a student in The University of Texas Graduate School of Biomedical Sciences, a joint program of MD Anderson and The University of Texas Health Science Center at Houston (UTHealth).

He also is affiliated with the Center for Molecular Medicine and the Graduate Institute of Cancer Biology, both of the China Medical University Hospital in Taichung, Taiwan and with Asia University in Taichung.

Designing New Molecular Tools to Study the Life and Death of a Cancer Cell

ScienceDaily (Feb. 16, 2011) — Basic and translational research on cancer, and development of new cancer therapeutics, has focused on different aspects of cancer cellular function. One area of focus is the life and death of a cancer cell. Apoptosis, also known as programmed cell death, is a fundamental process of cells including cancer cells. The signal transduction pathways of apoptosis involve many different proteins and their interactions with each other. Protein-protein interactions involved in these apoptotic signals, like those in many other biological processes, are often determined or influenced by a short fragment of protein sequence or even certain key amino acid residues with important functional or structural roles in the protein-protein interface. For biomedical and pharmaceutical scientists, developing new molecular tools to understand and control the functions of these small protein fragments or residues and the biological and pathological processes that they mediate is a task and challenge of both fundamental interest and practical value.

In the work published in the February issue of Experimental Biology and Medicine, Huang, Zhang, Reed, An and their coworkers have developed new synthetic molecules as models to study the structural and functional role of the proline residue and tetrapeptide sequence important for the regulation of cancer cell apoptosis by the XIAP protein. The work was carried out jointly by the laboratories of Ziwei Huang and Jing An, formerly at the Sanford-Burnham Medical Research Institute in La Jolla, California and now the Cancer Research Institute and Department of Pharmacology of the State University of New York (SUNY) Upstate Medical University in Syracuse, New York, Liangren Zhang at Peking University School of Pharmaceutical Sciences in Beijing, China, and John Reed at Sanford-Burnham Medical Research Institute.

Dr. Huang, who led this international research team, stated "research on protein-protein interactions and their synthetic modulators has become a new frontier for biomedical research and pharmaceutical development. We have chosen a proline containing tetrapeptide as the model to develop new peptidomimetic molecules to study the role of proline and tetrapeptide in the binding of XIAP protein and potential inhibition of XIAP mediated protein-protein interactions critical for apoptotic signaling in cancer cells. Our results suggest that these tetrapeptide analogs can be further developed into new molecular tools to analyze the mechanisms of protein-protein interactions and signal transduction pathways of XIAP in cancer and potential leads to develop anticancer drugs. This study combined the techniques in structure-based drug design, chemistry, and cancer biology and expertise and resources at institutions in America and China. It is an example of international collaboration to apply chemistry to biology and medicine with the long term goal of finding new anticancer therapeutics."

The research team used the crystal structure of a known tetrapeptide AVPI derived from Smac protein bound to XIAP protein as the guide to design a series of peptidomimetic analogs containing a conformationally constrained proline mimetic exo-2-azabicyclo[2.2.1]heptane-3-carboxylic acid. Structural analyses using nuclear magnetic resonance (NMR) and molecular modeling showed that some of these analogs can mimic the conformations of the parent tetrapeptide. Using a fluorescence polarization assay, one of these analogs was shown to be potent like the parent tetrapeptide in binding XIAP protein. This raises the possibility that such an analog may inhibit the antiapoptotic function of XIAP (a protein inhibitor of apoptosis), thus removing the roadblock of the death signal to kill a cancer cell.

Dr. John Reed, who led the binding and biological studies of these molecules in La Jolla, California, said, "The progress made through our collaborations with Dr. Huang and colleagues is a component of a substantial commitment we have made at Sanford-Burnham to discovery and design of small molecule chemical inhibitors of IAP family proteins as potential therapeutics for cancer. We are eager to advance the work towards drug-like leads that might provide renewed hope for those suffering from advanced malignancies."

The design and synthesis of the peptide analogs described in the study are the beginning steps in the long process of research and development of suitable pharmaceutical agents capable of penetrating a cancer cell membrane to reach the XIAP target and triggering the signaling pathway that causes the death of cancer cells in vivo. While further modifications and studies are needed on these peptide analogs in order to show their practical values as cell permeable anticancer agents, the present study of these analogs is of basic research interest for understanding the role of proline and conformation of prolyl peptide bond in mediating the biological function of a protein. It is known that the two different conformational isomers (cis and trans isomers) of the prolyl peptide bond can mediate distinct function of the protein. Many studies in the past of proline and proline mimics show either a mixture of cis and trans isomers or purely cis isomer. In this study, the proline mimic displayed strictly the trans conformation. The interesting conformational and functional effects of the synthetic unnatural mimic of proline discovered here suggest an alternative probe of prolyl isomerization in biology and that such a proline mimic can be applied to study the role of proline and proline containing sequence in other protein-protein interactions involved in a wide range of biological functions.

Steven R. Goodman, Editor-in-Chief of Experimental Biology and Medicine, said "This elegant study by Ziwei Huang and colleagues explores the role of proline containing peptides in inhibiting the anti-apoptotic function of XIAP. This will potentially lead the way to new designer anti-cancer drugs. The article is a wonderful example of the interdisciplinary and international research that is the focus of our journal."

Erg Gene Key to Blood Stem Cell 'Self-Renewal'

ScienceDaily (Feb. 16, 2011) — Scientists from the Walter and Eliza Hall Institute have begun to unravel how blood stem cells regenerate themselves, identifying a key gene required for the process.
Dr. Samir Taoudi from the Walter and Eliza Hall Institute in Melbourne, Australia, has identified a key gene involved in blood stem cells' unique ability to self-renew. 
The discovery that the Erg gene is vitally important to blood stem cells' unique ability to self-renew could give scientists new opportunities to use blood stem cells for tissue repair, transplantation and other therapeutic applications.

Professor Doug Hilton, Dr Samir Taoudi and colleagues from the institute's Molecular Medicine and Cancer and Haematology divisions led the study. Dr Taoudi said the research aimed to understand how blood stem cells are made.

"One of the key features of blood stem cells, one that could be exploited for therapeutic use, is their ability to regenerate or renew themselves," Dr Taoudi said. "However, relatively little is known about how this occurs, or the molecular pathways that specifically control regeneration."

Blood stem cells are required to produce and maintain the blood system throughout an organism's lifetime. They are multipotent cells, meaning they are able to form any cell of the blood system (but not other cells), and they self-renew, so they are a source of endless supply. However, one major barrier to their therapeutic use is that the cells can only be isolated in numbers too low for practical use and efforts to expand the number of cells often causes them to turn into more mature cells.

"At the moment, if you take stem cells from a person and try to expand them, many of the stem cells lose their ability to regenerate," Dr Taoudi said. "The practical aim of our research is to find ways in which you could take stem cells collected from bone marrow or cord blood and 'switch on' expression of particular sets of genes, encouraging the stem cells to expand, essentially creating your own endless supply of blood stem cells."

Institute researchers had previously discovered that ERG was vital for the proper function of adult blood stem cells. They decided to look at blood stem cells in a developing embryo, a time when the cells are particularly active, to determine ERG's role in stem cell production and maintenance.

"We found that during development, ERG was not needed for the original blood stem cells to be made, or to produce mature blood cells," Dr Taoudi said. "But without ERG, these new blood stem cells rapidly decreased as they divided to produce more blood, so that they were almost completely exhausted by the time the mouse was born."

Further testing revealed that two other genes important in embryonic development, GATA2 and RUNX1, were controlled by ERG at the blood producing stage of development.

"These genes are called transcription factors, they are the 'switches' that turn on and off other genes," Dr Taoudi said. "Individually, these genes are not essential for regeneration, but if you lose both, the stem cells are quickly exhausted. This is a key part of the puzzle, but we will continue to work to find out how these genes directly control self-renewal, and the signals that actually tell the stem cell to regenerate."

Dr Taoudi said that although the finding had promise for the future therapeutic use of blood stem cells, there was still a lot of work to be done.

"We have found part of the pathway required for the expansion of blood stem cells under normal conditions, but from a translation perspective, we still need to establish whether increasing expression of these genes will actually lead to expansion in a culture dish," he said.